SNP Profiles matching PNG 215

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CT	GG	GG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
1._CC_137	CT	GG	GG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
2._GC-01-134-7-11	CT	GG	GG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
3._PNG_215	CT	GG	GG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
4._PNG_215	CT	GG	GG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
5._PNG_215	CT	GG	GG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
6._PNG_215	CT	GG	GG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
7._PNG_215	CT	GG	GG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
8._PNG_215	CT	GG	GG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
9._PNG_215	CT	GG	GG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
10._PNG_215	CT	GG	GG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
11._GC-01-084-5-01	CT	GG	GG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
12._GC-01-084-5-01	CT	GG	GG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
13._GC-01-084-5-01	CT	GG	GG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
14._GC-01-084-5-01	CT	GG	GG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
15._GC-01-107-6-04	CT	GG	GG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
16._GC-01-107-6-04	CT	GG	GG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
17._GC-01-107-6-04	CT	GG	GG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
18._GC-01-107-6-04	CT	GG	GG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
19._GC-01-107-6-04	CT	GG	GG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
20._RUQ_1293	_	GG	GG	CT	_	_	_	GT	_	_	_	_	CT	AA
21._RUQ_1293	CT	GG	GG	CT	TT	AC	CT	GT	CC	CT	AA	AA	CT	AA

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CC	AA	GG	TT	CC	CC	GT	AA	CC	CC	CC	GT	CT	CC
1._CC_137	CC	AA	GG	TT	CC	CC	GT	AA	CC	CC	CC	GT	CT	CC
2._GC-01-134-7-11	CC	AA	GG	TT	CC	CC	GT	AA	CC	CC	CC	GT	CT	CC
3._PNG_215	CC	AA	GG	TT	CC	CC	GT	AA	CC	CC	CC	GT	CT	CC
4._PNG_215	CC	AA	GG	TT	CC	CC	GT	AA	CC	CC	CC	GT	CT	CC
5._PNG_215	CC	AA	GG	TT	CC	CC	GT	AA	CC	CC	CC	GT	CT	CC
6._PNG_215	CC	AA	GG	TT	CC	CC	GT	AA	CC	CC	CC	GT	CT	CC
7._PNG_215	CC	AA	GG	TT	CC	CC	GT	AA	CC	CC	CC	GT	CT	CC
8._PNG_215	CC	AA	GG	TT	CC	CC	GT	AA	CC	CC	CC	GT	CT	CC
9._PNG_215	CC	AA	GG	TT	CC	CC	GT	AA	CC	CC	CC	GT	CT	CC
10._PNG_215	CC	AA	GG	TT	CC	CC	GT	AA	CC	CC	CC	GT	CT	CC
11._GC-01-084-5-01	CC	AA	GG	TT	CC	CC	GT	AA	CC	CC	CC	GT	CT	CC
12._GC-01-084-5-01	CC	AA	GG	TT	CC	CC	GT	AA	CC	CC	CC	GT	CT	CC
13._GC-01-084-5-01	CC	AA	GG	TT	CC	CC	GT	AA	CC	CC	CC	GT	CT	CC
14._GC-01-084-5-01	CC	AA	GG	TT	CC	CC	GT	AA	CC	CC	CC	GT	CT	CC
15._GC-01-107-6-04	CC	AA	GG	TT	CC	CC	GT	AA	CC	CC	CC	GT	CT	CC
16._GC-01-107-6-04	CC	AA	GG	TT	CC	CC	GT	AA	CC	CC	CC	GT	CT	CC
17._GC-01-107-6-04	CC	AA	GG	TT	CC	CC	GT	AA	CC	CC	CC	GT	CT	CC
18._GC-01-107-6-04	CC	AA	GG	TT	CC	CC	GT	AA	CC	CC	CC	GT	CT	CC
19._GC-01-107-6-04	CC	AA	GG	TT	CC	CC	GT	AA	CC	CC	CC	GT	CT	CC
20._RUQ_1293	_	_	_	_	CC	CC	GT	_	CC	CC	CC	GT	CT	CC
21._RUQ_1293	CC	AA	GG	TT	CC	CC	GT	AA	CC	CC	CC	GT	CT	CC

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	AA	GG	AT	CC	AG	GG	AA	CT	GG	AC	AT	GG	X_X	X_X
1._CC_137	AA	GG	AT	CC	AG	GG	AA	CT	GG	AC	AT	GG	X_X	X_X
2._GC-01-134-7-11	AA	GG	AT	CC	AG	GG	AA	CT	GG	AC	AT	GG	X_X	X_X
3._PNG_215	AA	GG	AT	CC	AG	GG	AA	CT	GG	AC	AT	GG	X_X	X_X
4._PNG_215	AA	GG	AT	CC	AG	GG	AA	CT	GG	AC	AT	GG	X_X	X_X
5._PNG_215	AA	GG	AT	CC	AG	GG	AA	CT	GG	AC	AT	GG	X_X	X_X
6._PNG_215	AA	GG	AT	CC	AG	GG	AA	CT	GG	AC	AT	GG	X_X	X_X
7._PNG_215	AA	GG	AT	CC	AG	GG	AA	CT	GG	AC	AT	GG	X_X	X_X
8._PNG_215	AA	GG	AT	CC	AG	GG	AA	CT	GG	AC	AT	GG	X_X	X_X
9._PNG_215	AA	GG	AT	CC	AG	GG	AA	CT	GG	AC	AT	GG	X_X	X_X
10._PNG_215	AA	GG	AT	CC	AG	GG	AA	CT	GG	AC	AT	GG	X_X	X_X
11._GC-01-084-5-01	AA	GG	AT	CC	AG	GG	AA	CT	GG	AC	AT	GG	X_X	X_X
12._GC-01-084-5-01	AA	GG	AT	CC	AG	GG	AA	CT	GG	AC	AT	GG	X_X	X_X
13._GC-01-084-5-01	AA	GG	AT	CC	AG	GG	AA	CT	GG	AC	AT	GG	X_X	X_X
14._GC-01-084-5-01	AA	GG	AT	CC	AG	GG	AA	CT	GG	AC	AT	GG	X_X	X_X
15._GC-01-107-6-04	AA	GG	AT	CC	AG	GG	AA	CT	GG	AC	AT	GG	X_X	X_X
16._GC-01-107-6-04	AA	GG	AT	CC	AG	GG	AA	CT	GG	AC	AT	GG	X_X	X_X
17._GC-01-107-6-04	AA	GG	AT	CC	AG	GG	AA	CT	GG	AC	AT	GG	X_X	X_X
18._GC-01-107-6-04	AA	GG	AT	CC	AG	GG	AA	CT	GG	AC	AT	GG	X_X	X_X
19._GC-01-107-6-04	AA	GG	AT	CC	AG	GG	AA	CT	GG	AC	AT	GG	X_X	X_X
20._RUQ_1293	AA	_	AT	CC	AG	GG	AA	CT	GG	AC	_	_	X_X	X_X
21._RUQ_1293	AA	GG	AT	CC	AG	GG	AA	CT	GG	AC	AT	GG	X_X	X_X

Input profile: PNG_215

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Mars Center for Cocoa Science, Brazil

Location: 1604 1

Dapeng Zhang, 2016

1._CC_137

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1711 4

Dapeng Zhang, 2016

2._CC_137 GC-01-134-7-11

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

3._PNG_215

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1501 1

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

4._PNG_215

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1501 2

Dapeng Zhang, 2016

5._PNG_215

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1501 3

Dapeng Zhang, 2016

6._PNG_215

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1501 4

Dapeng Zhang, 2016

7._PNG_215

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1604 2

Dapeng Zhang, 2016

8._PNG_215

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1604 3

Dapeng Zhang, 2016

9._PNG_215

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1604 4

Dapeng Zhang, 2016

10._PNG_215

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1604 5

Dapeng Zhang, 2016

11._PNG_215 GC-01-084-5-01

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

12._PNG_215 GC-01-084-5-01

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

13._PNG_215 GC-01-084-5-01

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

14._PNG_215 GC-01-084-5-01

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

15._PNG_215 GC-01-107-6-04

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

16._PNG_215 GC-01-107-6-04

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

17._PNG_215 GC-01-107-6-04

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

18._PNG_215 GC-01-107-6-04

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

19._PNG_215 GC-01-107-6-04

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

20._PNG_215 RUQ_1293

identical
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

21._PNG_215 RUQ_1293

98.8 %
40 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1075	12	TcSNP1062	13	TcSNP1060	14	TcSNP998	15	TcSNP994
16	TcSNP953	17	TcSNP929	18	TcSNP917	19	TcSNP891	20	TcSNP872
21	TcSNP723	22	TcSNP645	23	TcSNP619	24	TcSNP591	25	TcSNP577
26	TcSNP560	27	TcSNP534	28	TcSNP529	29	TcSNP469	30	TcSNP429
31	TcSNP372	32	TcSNP242	33	TcSNP230	34	TcSNP226	35	TcSNP193
36	TcSNP151	37	TcSNP150	38	TcSNP144	39	TcSNP32	40	TcSNP25